QuickBooks Web Connector Error QBWC1039 appears when QuickBooks cannot establish communication with a third-party app. It may result from moving the company file, renaming it, or using outdated connectors. To resolve this, first, ensure that the application is authorized in QuickBooks. Then, delete and re-add the app in the Web Connector tool. Opening QuickBooks with admin privileges before syncing is also recommended. Keeping both QuickBooks Desktop and Web Connector updated reduces the chances of recurring QBWC1039 errors.